{"id":32475,"date":"2026-05-26T12:09:06","date_gmt":"2026-05-26T10:09:06","guid":{"rendered":"https:\/\/www.laborberlin.com\/?page_id=32475"},"modified":"2026-05-28T15:07:37","modified_gmt":"2026-05-28T13:07:37","slug":"open-source-software-fur-humangenetische-diagnostik","status":"publish","type":"page","link":"https:\/\/www.laborberlin.com\/en\/open-source-software-fur-humangenetische-diagnostik\/","title":{"rendered":"Open-source software for human genetic diagnostics"},"content":{"rendered":"<div class=\"Module Banner Banner--small  Background Background--bioinformatikFullTone Color Color--white\" >\n    <div class=\"container\">\n        <div class=\"grid grid--size12 \">\n            <div class=\"Banner__content grid--size5Tp\">\n                                    <h1 class=\"Banner__title\">New solution for the VarVis API \u2013 the VarVis Connector<\/h1>\n                \n                \n                \n                \n<a href=\"https:\/\/github.com\/LaborBerlin\/varvis-connector\" target=\"_blank\" class=\"Button Button--primary\">Purchase a licence here<\/a>\n            <\/div>\n            <div class=\"grid--size12 grid--size7Tp\">\n                                                    <div class=\"Banner__image\">\n                        \n    <picture\n                class=\"Picture Banner__picture Picture--hero\"\n    >\n        <img decoding=\"async\"\n                src=\"\"\n                        data-srcset=\"https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/open-source-2-unsplash.jpg 1920w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/open-source-2-unsplash-768x512.jpg 768w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/open-source-2-unsplash-1536x1024.jpg 1536w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/open-source-2-unsplash-1600x1067.jpg 1600w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/open-source-2-unsplash-1024x683.jpg 1024w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/open-source-2-unsplash-800x533.jpg 800w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/open-source-2-unsplash-600x400.jpg 600w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/open-source-2-unsplash-400x267.jpg 400w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/open-source-2-unsplash-390x260.jpg 390w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/open-source-2-unsplash-780x520.jpg 780w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/open-source-2-unsplash-510x340.jpg 510w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/open-source-2-unsplash-1020x680.jpg 1020w\"                class=\"lazyload Picture__image\"\n                alt=\"\"\n            title=\"open-source-2-unsplash\"\/>\n\n        \n        <noscript>\n            <img decoding=\"async\" src=\"https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/open-source-2-unsplash-1024x683.jpg\" alt=\"\" title=\"open-source-2-unsplash\"\/>\n        <\/noscript>\n    <\/picture>\n\n                        <\/div>\n                            <\/div>\n        <\/div>\n    <\/div>\n<\/div>\n\n    <div class=\"container\">\n        <div class=\"Breadcrumb\">\n    <ul class=\"Breadcrumb__list\" itemscope itemtype=\"https:\/\/schema.org\/BreadcrumbList\">\n        \n                <li itemprop=\"itemListElement\" itemscope itemtype=\"http:\/\/schema.org\/ListItem\" class=\"Breadcrumb__item breadcrumb__item--home\">\n        <a itemprop=\"item\" href=\"https:\/\/www.laborberlin.com\/en\/\" class=\"Breadcrumb__link\">\n            <span itemprop=\"name\">Labor Berlin<\/span>\n        <\/a>\n        <meta itemprop=\"position\" content=\"1\" \/>\n    <\/li>\n    \n                <li itemprop=\"itemListElement\" itemscope itemtype=\"http:\/\/schema.org\/ListItem\" class=\"Breadcrumb__item breadcrumb__item--current\">\n        <a itemprop=\"item\" href=\"https:\/\/www.laborberlin.com\/en\/wp-json\/wp\/v2\/pages\/32475\/\" class=\"Breadcrumb__link\">\n            <span itemprop=\"name\">Page<\/span>\n        <\/a>\n        <meta itemprop=\"position\" content=\"2\" \/>\n    <\/li>\n        <\/ul>\n<\/div>\n    <\/div>\n\n\n<div class=\"Module Text Background Background--transparent\" >\n    <div class=\"container\">\n        \n\n                                <div class=\"Text__content Text__content--full\">\n                <h2>Digital solutions for modern human genetic diagnostics<\/h2>\n<p>The increasing complexity of genetic analyses requires powerful digital processes and the efficient processing of large volumes of data. Labor Berlin develops its own software solutions in the fields of bioinformatics and data science to support modern diagnostic workflows.<\/p>\n<p>With the \u2018VarVis-connector\u2019, Labor Berlin provides an open-source solution that supports the integration and use of the VarVis analysis platform in human genetic diagnostics.<\/p>\n<h2>What is the VarVis connector?<\/h2>\n<p>The VarVis-connector is a Python-based software package designed to interface with the VarVis API. The solution supports the automated processing and integration of genomic data into diagnostic workflows.<\/p>\n<p><strong>The package includes:<\/strong><\/p>\n<ul>\n<li>an application programming interface (API)<\/li>\n<li>a command-line interface (CLI)<\/li>\n<li>data validation and error handling<\/li>\n<li>functions for processing genetic analysis and quality data.<\/li>\n<\/ul>\n<p>The software is used in human genetic diagnostics and supports efficient workflows in NGS-based analysis.<\/p>\n            <\/div>\n            <\/div>\n<\/div>\n\n\n\n\n<div class=\"Module ImageText ImageText--imageText Background Background--bioinformatik\" >\n    <div class=\"container\">\n        <div class=\"grid grid--vCenter grid--size12 grid--size6Tp grid--bigGaps\">\n            <div class=\"ImageText__imageColumn\">\n                <div class=\"ImageText__imageWrap\">\n                    \n    <picture\n        style=\"padding-top: 64.453125%\"         class=\"Picture ImageText__image\"\n    >\n        <img decoding=\"async\"\n                src=\"\"\n                        data-srcset=\"https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/open-source-1-unsplash.jpg 1920w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/open-source-1-unsplash-768x495.jpg 768w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/open-source-1-unsplash-1536x990.jpg 1536w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/open-source-1-unsplash-1600x1032.jpg 1600w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/open-source-1-unsplash-1024x660.jpg 1024w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/open-source-1-unsplash-800x516.jpg 800w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/open-source-1-unsplash-600x387.jpg 600w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/open-source-1-unsplash-400x258.jpg 400w\"                class=\"lazyload Picture__image\"\n                alt=\"\"\n            title=\"open-source-1-unsplash\"\/>\n\n        \n        <noscript>\n            <img decoding=\"async\" src=\"https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/open-source-1-unsplash-1024x660.jpg\" alt=\"\" title=\"open-source-1-unsplash\"\/>\n        <\/noscript>\n    <\/picture>\n\n                    <\/div>\n            <\/div>\n\n            <div class=\"ImageText__textWrap\">\n                \n                <h3>Open Source and Transparency<\/h3>\n<p>The varvis-connector is made publicly available as open-source software. In doing so, Labor Berlin aims to promote transparency and support scientific exchange in the field of digital diagnostics.<\/p>\n<p>The software is available via GitHub and PyPI and can be used by developers, research institutions and diagnostic laboratories.<\/p>\n                \n\n            <\/div>\n        <\/div>\n    <\/div>\n<\/div>\n\n\n<div class=\"Module TeaserColumns Background Background--bioinformatik\" >\n    <div class=\"container\">\n            <Header class=\"Module__header\">\n                    <h2>Buy licences online<\/h2>\n        \n        \n        \n\n    <\/Header>\n\n\n        \n                    <div class=\"TeaserColumns__list grid grid--size12  grid--size4T grid--size6Tp\">\n                                    <div class=\"TeaserColumns__item\">\n                        \n                                                    <div class=\"TeaserColumns__image\">\n                                \n    <picture\n                class=\"Picture  Picture--hero\"\n    >\n        <img decoding=\"async\"\n                src=\"\"\n                        data-srcset=\"https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/python-Package-Index-Logo.png 458w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/python-Package-Index-Logo-400x259.png 400w\"                class=\"lazyload Picture__image\"\n                alt=\"\"\n            title=\"python Package Index Logo\"\/>\n\n        \n        <noscript>\n            <img decoding=\"async\" src=\"https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/python-Package-Index-Logo.png\" alt=\"\" title=\"python Package Index Logo\"\/>\n        <\/noscript>\n    <\/picture>\n\n                                <\/div>\n                        \n                        \n                                                    \n<a href=\"https:\/\/pypi.org\/project\/varvis-connector\/\" target=\"_blank\" class=\"Button Button--primaryLight\">Purchase a licence here via PyPI<\/a>\n                                            <\/div>\n                                    <div class=\"TeaserColumns__item\">\n                        \n                                                    <div class=\"TeaserColumns__image\">\n                                \n    <picture\n                class=\"Picture  Picture--hero\"\n    >\n        <img decoding=\"async\"\n                src=\"\"\n                        data-srcset=\"https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/GitHub.png 442w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/GitHub-400x224.png 400w\"                class=\"lazyload Picture__image\"\n                alt=\"\"\n            title=\"GitHub\"\/>\n\n        \n        <noscript>\n            <img decoding=\"async\" src=\"https:\/\/www.laborberlin.com\/wp-content\/uploads\/2026\/05\/GitHub.png\" alt=\"\" title=\"GitHub\"\/>\n        <\/noscript>\n    <\/picture>\n\n                                <\/div>\n                        \n                        \n                                                    \n<a href=\"https:\/\/github.com\/LaborBerlin\/varvis-connector\" target=\"_blank\" class=\"Button Button--primaryLight\">Purchase a licence here via GitHub<\/a>\n                                            <\/div>\n                            <\/div>\n            <\/div>\n<\/div>\n\n\n\n<div class=\"Module Text Background Background--transparent\" >\n    <div class=\"container\">\n        \n\n                                <div class=\"Text__content Text__content--full\">\n                <h3>Bioinformatics and Data Science at Labor Berlin<\/h3>\n<p>The varvis-connector was developed by the Bioinformatics and Data Science department at Labor Berlin.<\/p>\n<p>The department supports modern diagnostic procedures through:<\/p>\n<ul>\n<li>Data integration<\/li>\n<li>Process automation<\/li>\n<li>Bioinformatic analyses<\/li>\n<li>Digital workflow development<\/li>\n<\/ul>\n<p>The aim is the continuous development of efficient, high-quality diagnostic processes.<\/p>\n            <\/div>\n            <\/div>\n<\/div>\n\n\n\n\n<div class=\"Module TeaserColumns Background Background--warmGrey\" >\n    <div class=\"container\">\n            <Header class=\"Module__header\">\n                    <h2>Contact<\/h2>\n        \n        \n        \n\n    <\/Header>\n\n\n        \n                    <div class=\"TeaserColumns__list grid grid--size12  grid--size4T grid--size6Tp\">\n                                    <div class=\"TeaserColumns__item\">\n                                                    <span class=\"Topline TeaserColumns__topline\">Dr. rer. nat. Johannes Helmuth<\/span>\n                        \n                                                    <div class=\"TeaserColumns__image\">\n                                \n    <picture\n                class=\"Picture  Picture--hero\"\n    >\n        <img decoding=\"async\"\n                src=\"\"\n                        data-srcset=\"https:\/\/www.laborberlin.com\/wp-content\/uploads\/2024\/06\/Johannes-Helmut-scaled-1.jpg 2560w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2024\/06\/Johannes-Helmut-scaled-1-768x576.jpg 768w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2024\/06\/Johannes-Helmut-scaled-1-1536x1152.jpg 1536w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2024\/06\/Johannes-Helmut-scaled-1-2048x1536.jpg 2048w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2024\/06\/Johannes-Helmut-scaled-1-1600x1200.jpg 1600w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2024\/06\/Johannes-Helmut-scaled-1-1024x768.jpg 1024w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2024\/06\/Johannes-Helmut-scaled-1-800x600.jpg 800w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2024\/06\/Johannes-Helmut-scaled-1-600x450.jpg 600w, https:\/\/www.laborberlin.com\/wp-content\/uploads\/2024\/06\/Johannes-Helmut-scaled-1-400x300.jpg 400w\"                class=\"lazyload Picture__image\"\n                alt=\"\"\n            title=\"Johannes-Helmut-scaled-1\"\/>\n\n        \n        <noscript>\n            <img decoding=\"async\" src=\"https:\/\/www.laborberlin.com\/wp-content\/uploads\/2024\/06\/Johannes-Helmut-scaled-1.jpg\" alt=\"\" title=\"Johannes-Helmut-scaled-1\"\/>\n        <\/noscript>\n    <\/picture>\n\n                                <\/div>\n                        \n                                                    <p>Head of Bioinformatics &amp; Data Science<\/p>\n                        \n                                                    \n                            <a href=\"javascript:mailto('nbjmup;Kpibooft\/IfmnvuiAmbcpscfsmjo\/dpn');\" class=\"TeaserColumns__more More\">send e-mail<\/a>\n                                            <\/div>\n                                    <div class=\"TeaserColumns__item\">\n                                                    <span class=\"Topline TeaserColumns__topline\">Selma Yasar<\/span>\n                        \n                                                    <div class=\"TeaserColumns__image\">\n                                \n    <picture\n                class=\"Picture  Picture--hero\"\n    >\n        <img decoding=\"async\"\n                src=\"\"\n                        data-src=\"https:\/\/www.laborberlin.com\/wp-content\/uploads\/2025\/10\/Selma-Yasar-scaled.jpg\"                class=\"lazyload Picture__image\"\n                alt=\"\"\n            title=\"Selma-Yasar-1-scaled\"\/>\n\n        \n        <noscript>\n            <img decoding=\"async\" src=\"https:\/\/www.laborberlin.com\/wp-content\/uploads\/2025\/10\/Selma-Yasar-scaled.jpg\" alt=\"\" title=\"Selma-Yasar-1-scaled\"\/>\n        <\/noscript>\n    <\/picture>\n\n                                <\/div>\n                        \n                                                    <p>Bioinformatician<\/p>\n                        \n                                                    \n                            <a href=\"javascript:mailto('nbjmup;tfmnb\/zbtbsAmbcpscfsmjo\/dpn');\" class=\"TeaserColumns__more More\">send e-mail<\/a>\n                                            <\/div>\n                            <\/div>\n            <\/div>\n<\/div>\n\n","protected":false},"excerpt":{"rendered":"","protected":false},"author":34,"featured_media":0,"parent":0,"menu_order":3,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"footnotes":""},"class_list":["post-32475","page","type-page","status-publish","hentry"],"acf":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v25.7 - 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